Add intron features to gtf/gff file without intron features.
meta:map
Groovy Map containing sample information e.g. [ id:‘test’, single_end
gff:file
Input gtf/gff file
*.{gff,gff3,gtf}
config:file
Optional input agat config file
*.{yaml,yml}
gff
meta:file
Output gff3 file with introns
*.gff
${output}:file
versions
versions.yml:file
File containing software versions
versions.yml
Another Gff Analysis Toolkit (AGAT). Suite of tools to handle gene annotations in any GTF/GFF format.